Solyc10g086440.2.1 (Solyc10g086440.2)


Aliases : Solyc10g086440.2

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family DNA binding with one finger 2.4 (DOF2.4)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g086440.2.1
Cluster HCCA cluster: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.07 Gene family
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT3G55370 OBP3 OBF-binding protein 3 0.03 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
GSVIVT01005057001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01016538001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01019969001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01025119001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
LOC_Os07g32510 Os07g0508700,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_83624g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc06g005130.3.1 Solyc06g005130.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g075370.3.1 Solyc06g075370.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc06g076030.3.1 Solyc06g076030.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d010740 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d012963 GRMZM2G144172,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.09 Gene family
Zm00001d017788 GRMZM2G140694 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
Zm00001d021591 GRMZM2G134545,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d035651 GRMZM2G179069 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.1 Gene family
Zm00001d038693 GRMZM2G435475 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 86 141
No external refs found!