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  5. Adi_g017565

Adi_g017565


Description : not classified & original description: none


Gene families : OG0002687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017565

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00201p00015360 evm_27.TU.AmTr_v1... Cold shock protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g00878 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g60600.1 LOC_Os03g60600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g00896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g054330.3.1 Solyc10g054330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 118 135
IPR001878 Znf_CCHC 38 54
IPR001878 Znf_CCHC 138 153
IPR001878 Znf_CCHC 218 233
IPR001878 Znf_CCHC 198 213
IPR001878 Znf_CCHC 75 91
IPR001878 Znf_CCHC 95 110
No external refs found!