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  5. Adi_g017500

Adi_g017500 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017500
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Adi_g058538 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079520 KNAT3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.70 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Dcu_g03972 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15128 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g19694.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08544.1 KNAT3, LOC_Os02g08544 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Ore_g07720 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11713 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001775 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1104 0.02 OrthoFinder output from all 47 species
Smo90744 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Solyc02g081120.4.1 BUM1, SHL, STM,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Solyc05g005090.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e013853_P001 KNAT3, Zm00001e013853 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR005541 KNOX2 362 410
IPR005540 KNOX1 302 341
No external refs found!