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  5. Adi_g017416

Adi_g017416 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017416

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00110430 ZFN2,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
AT1G48195 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Adi_g061090 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g112322 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ala_g08740 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g21159 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aop_g08222 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010980001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os01g15350.1 LOC_Os01g15350 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g07740 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pir_g15925 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g49910 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 21 46
IPR000571 Znf_CCCH 68 90
IPR000571 Znf_CCCH 110 135
No external refs found!