1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g017415

Adi_g017415 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017415

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00110430 ZFN2,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Adi_g061089 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013252 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01030514001 ZFN2 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os01g15350.1 LOC_Os01g15350 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g03707 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039538_P001 Zm00001e039538 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 17 42
IPR000571 Znf_CCCH 106 131
IPR000571 Znf_CCCH 63 86
No external refs found!