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  5. Adi_g017308

Adi_g017308 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00233600 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Ala_g18065 RBL4, ATRBL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15972 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G071700.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50635382... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.82 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01034160001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
LOC_Os11g47840.1 RBL1, ATRBL1,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06970 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Zm00001e016920_P001 RBL1, ATRBL1,... protease (RBL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 1 112
No external refs found!