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  5. Adi_g016820

Adi_g016820


Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g016820

Target Alias Description ECC score Gene Family Method Actions
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 OrthoFinder output from all 47 species
Adi_g022150 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10511 GR-RBP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02153 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06493 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g41120.1 GR-RBP3, LOC_Os07g41120 RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species
MA_12936g0020 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.03 OrthoFinder output from all 47 species
Mp2g24130.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Ore_g08963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43423 CCR1, GR-RBP8,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017933_P003 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 76
IPR001878 Znf_CCHC 136 151
No external refs found!