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  5. Adi_g015683

Adi_g015683


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g015683

Target Alias Description ECC score Gene Family Method Actions
Ala_g14316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.02 OrthoFinder output from all 47 species
Len_g07378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015168 No alias not classified & original description: CDS=1-606 0.03 OrthoFinder output from all 47 species
Smo107819 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.03 OrthoFinder output from all 47 species
Smo52385 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 289 321
IPR002885 Pentatricopeptide_repeat 36 92
IPR002885 Pentatricopeptide_repeat 331 360
IPR002885 Pentatricopeptide_repeat 190 220
IPR002885 Pentatricopeptide_repeat 715 745
IPR002885 Pentatricopeptide_repeat 572 621
IPR002885 Pentatricopeptide_repeat 502 551
IPR002885 Pentatricopeptide_repeat 222 270
IPR002885 Pentatricopeptide_repeat 642 691
IPR002885 Pentatricopeptide_repeat 120 164
IPR002885 Pentatricopeptide_repeat 432 480
IPR002885 Pentatricopeptide_repeat 362 411
No external refs found!