Solyc10g084340.2.1 (Solyc10g084340.2)


Aliases : Solyc10g084340.2

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family related to AP2.7 (RAP2.7)


Gene families : OG_01_0000034 (Gene family) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g084340.2.1
Cluster HCCA cluster: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g19900 Os03g0313100 33.99 development.unspecified Encodes an AP2-domain... 0.06 Gene family
LOC_Os05g03040 Os05g0121600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os05g32270 Os05g0389000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_10434312g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_2193g0020 No alias No description available 0.01 Gene family
MA_32193g0010 No alias No description available 0.01 Gene family
MA_75070g0010 No alias No description available 0.01 Gene family
MA_8090186g0010 No alias No description available 0.01 Gene family
MA_86195g0010 No alias No description available 0.02 Gene family
Zm00001d002025 GRMZM2G086573 33.99 development.unspecified Encodes a member of the... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 134 183
IPR001471 AP2/ERF_dom 226 276
No external refs found!