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  5. Ehy_g09273

Ehy_g09273 (CHR20, ATRX)


Aliases : CHR20, ATRX

Description : chromatin remodeling factor *(ATRX) & original description: none


Gene families : OG0003866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09273
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Adi_g021727 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21446 CHR20, ATRX not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27546 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16593 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26002 CHR20, ATRX not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13390 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G086900.1 CHR20, ATRX,... chromatin remodeling factor *(ATRX) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021760.3 CHR20, ATRX Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g34455 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023393001 CHR20, ATRX Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Pir_g00674 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000167 CHR20, ATRX chromatin remodeling factor *(ATRX) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g050160.4.1 CHR20, ATRX,... Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06181 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 761 1089
IPR001650 Helicase_C 1172 1297
No external refs found!