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  5. Adi_g015310

Adi_g015310


Description : component *(RNPS1) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0002814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g015310

Target Alias Description ECC score Gene Family Method Actions
Als_g12115 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Aop_g10362 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cre03.g164950 RNPS1, SR45 RNA processing.RNA quality control Exon Junction complex... 0.01 OrthoFinder output from all 47 species
Gb_20779 RNPS1, SR45 component RNPS1 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
MA_3280g0020 RNPS1, SR45 component RNPS1 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019602 RNPS1, SR45 not classified & original description: CDS=110-1036 0.03 OrthoFinder output from all 47 species
Solyc10g005590.4.1 RNPS1, SR45,... component RNPS1 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 130 197
No external refs found!