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  5. Adi_g015227

Adi_g015227 (PBF1)


Aliases : PBF1

Description : beta-type-6 component *(PBF) of 26S proteasome & original description: none


Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g015227
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00220020 PBF1,... Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Aev_g01998 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g08527 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00288 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ceric.24G072400.1 PBF1, Ceric.24G072400 beta-type-6 component *(PBF) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.5 PBF1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Cre26.g756797 PBF1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Dac_g02574 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dcu_g00884 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
GSVIVT01000943001 PBF1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
GSVIVT01027613001 PBF1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Gb_25087 PBF1 component beta type-6 of 26S proteasome 0.05 OrthoFinder output from all 47 species
MA_207139g0010 PBF1 component beta type-6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp1g12450.1 PBF1 component beta type-6 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Msp_g43692 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c16_16960V3.1 PBF1, Pp3c16_16960 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 OrthoFinder output from all 47 species
Solyc02g084920.3.1 PBF1, Solyc02g084920 component beta type-6 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Spa_g16539 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Tin_g30516 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 9 204
No external refs found!