Aliases : EMB3011
Description : RNA helicase *(Prp16) & original description: none
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00090p00083520 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
AT1G26370 | No alias | RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
Ala_g38553 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene64070.t1 | EMB3011, Aspi01Gene64070 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.01G059500.1 | Ceric.01G059500 | not classified & original description: pacid=50591809... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G064800.1 | ESP3, EMB2733,... | RNA helicase *(Prp2) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021589.28 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
Cre07.g349100 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g22478 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g21445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g19860.1 | LOC_Os02g19860 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | OrthoFinder output from all 47 species | |
Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_629782g0010 | EMB3011 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g02780.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g03460.1 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g21732 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g17219 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g42980 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g42990 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44212 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g04698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g14114 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0034.g011158 | No alias | not classified & original description: CDS=170-2296 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16290 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g115390.4.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g015040.4.1 | Solyc05g015040 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g07103 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12111 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g25913 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001487_P003 | Zm00001e001487 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038305_P001 | Zm00001e038305 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |