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  5. Adi_g014854

Adi_g014854


Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g014854
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
AT1G30440 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Als_g26847 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08861.t1 Aspi01Gene08861 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.21G036600.1 Ceric.21G036600 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ceric.31G041900.1 Ceric.31G041900 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01021598001 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
Gb_37723 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55830.1 LOC_Os03g55830 BTB/POZ domain-containing protein At5g66560... 0.04 OrthoFinder output from all 47 species
Lfl_g29709 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
MA_10430653g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024958 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Sam_g17668 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Sam_g37320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g090070.3.1 Solyc02g090070 BTB/POZ domain-containing protein At5g66560... 0.02 OrthoFinder output from all 47 species
Spa_g05885 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Zm00001e011959_P001 Zm00001e011959 BTB/POZ domain-containing protein At5g66560... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 143 395
No external refs found!