Description : histone *(H3) & original description: none
Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g014652 | |
Cluster | HCCA: Cluster_253 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g37515 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020960.54 | No alias | Histone H3.3 OS=Vitis vinifera | 0.01 | OrthoFinder output from all 47 species | |
Cre16.g649900 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g23375 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008160_P001 | Zm00001e008160 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016861_P001 | Zm00001e016861 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019170_P001 | Zm00001e019170 | histone (H3) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
CC | GO:0005739 | mitochondrion | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0008535 | respiratory chain complex IV assembly | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | HCCA |
BP | GO:0033617 | mitochondrial cytochrome c oxidase assembly | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
No external refs found! |