Aliases : MSH6-1, ATMSH6, MSH6
Description : component *(MSH6) of MSH2-x mismatch repair heterodimers & original description: none
Gene families : OG0001663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001663_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00029910 | MSH6-1, ATMSH6,... | DNA damage response.DNA repair mechanisms.mismatch... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00006p00242090 | MSH7, ATMSH7,... | DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene71892.t1 | MSH6-1, ATMSH6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g14545 | MSH6-1, ATMSH6, MSH6 | component *(MSH6) of MSH2-x mismatch repair heterodimers... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015407001 | MSH7, ATMSH7, MSH6-2 | DNA damage response.DNA repair mechanisms.mismatch... | 0.02 | OrthoFinder output from all 47 species | |
MA_10429110g0010 | MSH6-1, ATMSH6, MSH6 | component MSH6 of MSH2-x mismatch repair heterodimers | 0.02 | OrthoFinder output from all 47 species | |
MA_214705g0010 | MSH7, ATMSH7, MSH6-2 | DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g57163 | MSH6-1, ATMSH6, MSH6 | component *(MSH6) of MSH2-x mismatch repair heterodimers... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g08443 | MSH7, ATMSH7, MSH6-2 | component *(MSH7) of MSH2-x mismatch repair heterodimers... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g15143 | MSH6-1, ATMSH6, MSH6 | component *(MSH6) of MSH2-x mismatch repair heterodimers... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006298 | mismatch repair | IEA | Interproscan |
MF | GO:0030983 | mismatched DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |