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  5. Adi_g014208

Adi_g014208


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g014208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00120950 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
AT5G12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT5G42140 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 OrthoFinder output from all 47 species
Adi_g117138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054488 No alias not classified & original description: CDS=1991-5185 0.03 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Ehy_g25466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.07 OrthoFinder output from all 47 species
Len_g14356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006893 No alias not classified & original description: CDS=1775-4951 0.02 OrthoFinder output from all 47 species
Solyc04g071040.4.1 PRAF1, Solyc04g071040 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Solyc11g065120.3.1 Solyc11g065120 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
Tin_g04728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028130_P004 Zm00001e028130 PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Zm00001e028276_P001 Zm00001e028276 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e028312_P001 Zm00001e028312 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Zm00001e032303_P001 Zm00001e032303 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1041 1094
IPR027988 BRX_N 904 933
IPR000306 Znf_FYVE 657 718
IPR000408 Reg_chr_condens 431 480
IPR000408 Reg_chr_condens 496 544
IPR000408 Reg_chr_condens 548 596
IPR000408 Reg_chr_condens 376 427
IPR000408 Reg_chr_condens 325 373
IPR000408 Reg_chr_condens 601 648
No external refs found!