AMTR_s00154p00065510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.43

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0005106 (LandPlants) Phylogenetic Tree(s): OG_02_0005106_tree ,
OG_03_0004065 (SeedPlants) Phylogenetic Tree(s): OG_03_0004065_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00065510
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 Archaeplastida
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.06 Archaeplastida
GSVIVT01019645001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.07 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
Gb_39396 No alias iron chelator transporter (YSL) 0.05 Archaeplastida
Gb_40334 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os04g32050.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
LOC_Os04g44300.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 Archaeplastida
MA_10433998g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_7826635g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo179245 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
Solyc03g031920.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Solyc05g053110.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Solyc08g083060.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004813 OPT 32 230
IPR004813 OPT 254 593
No external refs found!