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  5. AMTR_s00154p00064710

AMTR_s00154p00064710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.42

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0005106 (LandPlants) Phylogenetic Tree(s): OG_02_0005106_tree ,
OG_03_0004065 (SeedPlants) Phylogenetic Tree(s): OG_03_0004065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064710
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00228960 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
AMTR_s00103p00133560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.02 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.01 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_924600g0010 No alias Probable metal-nicotianamine transporter YSL6... 0.03 Archaeplastida
MA_9934g0010 No alias iron chelator transporter (YSL) 0.03 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e026901_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_9934g0010 No alias iron chelator transporter (YSL) 0.02 LandPlants
MA_9934g0010 No alias iron chelator transporter (YSL) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 2 177
No external refs found!