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  5. Ehy_g09042

Ehy_g09042 (COL3, ATCOL3)


Aliases : COL3, ATCOL3

Description : floral promoter *(CONSTANS) & original description: none


Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09042

Target Alias Description ECC score Gene Family Method Actions
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.03 OrthoFinder output from all 47 species
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.03 OrthoFinder output from all 47 species
GSVIVT01029107001 ATCOL5, COL5 Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036499001 COL2, ATCOL2 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os02g39710.1 ATCOL5, COL5,... transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
LOC_Os04g42020.1 ATCOL5, COL5,... transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Len_g14533 COL1, ATCOL1 floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16644 No alias floral promoter *(CONSTANS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo185898 ATCOL4, COL4 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Zm00001e037706_P002 ATCOL5, COL5,... Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 68 110
IPR000315 Znf_B-box 111 155
IPR010402 CCT_domain 341 383
No external refs found!