Solyc10g080630.2.1 (Solyc10g080630.2)

Aliases : Solyc10g080630.2

Description : No description available

Gene families : OG_01_0004688 (Gene family) Phylogenetic Tree(s): OG0004688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc10g080630.2.1
Cluster	HCCA cluster: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AT3G11960	No alias	Cleavage and polyadenylation specificity factor (CPSF) A...	0.09	Gene family
Cpa\|evm.model.tig00021428.14	No alias	No description available	0.01	Gene family
GSVIVT01033428001	No alias	No description available	0.07	Gene family
LOC_Os07g10390	Os07g0203700	No description available	0.06	Gene family
MA_129261g0030	No alias	No description available	0.04	Gene family
Smo448595	PACid_15406837	No description available	0.04	Gene family
Zm00001d019115	GRMZM2G091449	27.1.1 RNA.processing.splicing Cleavage and...	0.05	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004871	Cleavage/polyA-sp_fac_asu_C	957	1345

External Links

No external refs found!