AMTR_s00154p00064240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.40

Description : Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0045444 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0040021 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064240
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00228960 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
AMTR_s00016p00229620 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.05 Archaeplastida
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.03 Archaeplastida
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.02 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
GSVIVT01019646001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
LOC_Os04g44300.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_924600g0010 No alias Probable metal-nicotianamine transporter YSL6... 0.05 Archaeplastida
MA_9934g0010 No alias iron chelator transporter (YSL) 0.04 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.04 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e015280_P004 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e026901_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e041350_P003 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004813 OPT 34 84
IPR004813 OPT 94 190
No external refs found!