1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g012829

Adi_g012829


Description : not classified & original description: none


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g012829

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27110.t1 Aspi01Gene27110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G003100.1 Ceric.23G003100 not classified & original description: pacid=50610792... 0.03 OrthoFinder output from all 47 species
Dcu_g12978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_36153 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g17624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10432734g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2296g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011767_P002 Zm00001e011767 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 566 596
IPR001680 WD40_repeat 437 487
IPR024761 TFIIIC_delta_N 64 190
No external refs found!