Solyc10g080180.2.1 (Solyc10g080180.2)


Aliases : Solyc10g080180.2

Description : 29.2.2.3.4 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006336 (Gene family) Phylogenetic Tree(s): OG0006336_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g080180.2.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G14050 No alias Transducin/WD40 repeat-like superfamily protein 0.12 Gene family
Cpa|evm.model.tig00020554.145 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.04 Gene family
Cre06.g255950 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.06 Gene family
GSVIVT01000726001 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.07 Gene family
GSVIVT01003806001 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.03 Gene family
LOC_Os07g41190 Os07g0603200 29.2.2.3.4 protein.synthesis.ribosome... 0.08 Gene family
Zm00001d014766 GRMZM2G099758 29.2.2.3.4 protein.synthesis.ribosome... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 254 280
IPR001680 WD40_repeat 426 454
IPR001680 WD40_repeat 378 411
No external refs found!