1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g012325

Adi_g012325 (AMSH1)


Aliases : AMSH1

Description : deubiquitinase *(AMSH) & original description: none


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g012325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00193370 AMSH1,... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT1G48790 AMSH1 associated molecule with the SH3 domain of STAM 1 0.02 OrthoFinder output from all 47 species
Ala_g23492 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G002000.1 AMSH1, Ceric.14G002000 deubiquitinase *(AMSH) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000248.12 AMSH2 Vesicle trafficking.endomembrane trafficking.protein... 0.01 OrthoFinder output from all 47 species
GSVIVT01035040001 AMSH1 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g23640.1 AMSH1, LOC_Os01g23640 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Lfl_g03972 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
MA_12198g0010 AMSH2 deubiquitinase (AMSH) 0.03 OrthoFinder output from all 47 species
Msp_g00569 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02175 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01316 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16877 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022666 AMSH1 deubiquitinase *(AMSH) & original description: CDS=122-1471 0.03 OrthoFinder output from all 47 species
Sam_g21741 No alias deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g119330.3.1 AMSH1, Solyc03g119330 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Tin_g03398 AMSH1 deubiquiTinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026261_P001 AMSH1, Zm00001e026261 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015063 USP8_dimer 11 103
IPR000555 JAMM/MPN+_dom 345 450
No external refs found!