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Aliases : APUM2, PUM2
Description : not classified & original description: none
Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00067490 | PUM1, APUM1,... | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00251030 | APUM2, PUM2,... | Pumilio homolog 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT2G29190 | APUM2, PUM2 | pumilio 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010436 | APUM2, PUM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g041741 | PUM5, APUM5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g079535 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61802 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g61874 | APUM4, PUM4 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000860 | PUM1, APUM1 | not classified & original description: CDS=178-3375 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s2326.g110592 | PUM1, APUM1 | not classified & original description: CDS=3742-4032 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G029200.1 | PUM1, APUM1,... | not classified & original description: pacid=50569734... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01016507001 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01029553001 | PUM5, APUM5 | Pumilio homolog 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031557001 | APUM6, PUM6 | Pumilio homolog 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30039 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_30040 | APUM6, PUM6 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31285 | APUM2, PUM2 | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g40830.1 | LOC_Os08g40830 | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08945 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10215 | APUM4, PUM4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10159883g0010 | PUM5, APUM5 | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434828g0010 | APUM2, PUM2 | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.1 | OrthoFinder output from all 47 species | |
| MA_23070g0010 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_42218g0010 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_9025256g0010 | PUM5, APUM5 | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g16700.1 | PUM1, APUM1 | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g27289 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11332 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_2770V3.1 | PUM1, APUM1, Pp3c8_2770 | pumilio 1 | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g36029 | PUM1, APUM1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006119 | No alias | phospholipase-A1 *(PC-PLA1) & original description: CDS=1-4779 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0136.g022409 | APUM2, PUM2 | not classified & original description: CDS=679-3840 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0253.g026782 | APUM2, PUM2 | not classified & original description: CDS=660-3872 | 0.04 | OrthoFinder output from all 47 species | |
| Smo1983 | APUM4, PUM4 | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Smo86145 | APUM4, PUM4 | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g123980.4.1 | PUM5, APUM5,... | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55430 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g15133 | APUM2, PUM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021916_P002 | APUM6, PUM6,... | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027653_P001 | PUM1, APUM1,... | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |