Solyc10g078720.2.1 (Solyc10g078720.2)


Aliases : Solyc10g078720.2

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP myb-like HTH transcriptional regulator family protein


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g078720.2.1
Cluster HCCA cluster: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021225001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
LOC_Os02g07170 Os02g0168200 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os04g56990 Os04g0665600 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
LOC_Os06g35140 Os06g0543200 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
LOC_Os09g23200 Os09g0395300 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_335624g0020 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_52379g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_8183372g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Smo405704 PACid_15415391 No description available 0.03 Gene family
Smo423935 PACid_15403043 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Smo438638 PACid_15422621 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc05g055940.3.1 Solyc05g055940.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Solyc07g045000.3.1 Solyc07g045000.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d036638 GRMZM2G100709 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d046981 GRMZM2G454449 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 309 356
IPR001005 SANT/Myb 229 278
No external refs found!