Solyc10g078620.1.1 (Solyc10g078620.1)

Aliases : Solyc10g078620.1

Description : protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5 One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A. ribosomal protein 5B (RPS5B)

Gene families : OG_01_0003282 (Gene family) Phylogenetic Tree(s): OG0003282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g078620.1.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G37270 RPS5B, ATRPS5B ribosomal protein 5B 0.29 Gene family
AT3G11940 AML1, RPS5A, ATRPS5A ribosomal protein 5A 0.38 Gene family
Cpa|evm.model.tig00021332.10 No alias protein.synthesis.ribosomal... 0.23 Gene family
Cre06.g290950 No alias protein.synthesis.ribosomal... 0.28 Gene family
GSVIVT01026328001 No alias protein.synthesis.ribosomal... 0.27 Gene family
GSVIVT01033419001 No alias protein.synthesis.ribosomal... 0.23 Gene family
LOC_Os01g01060 Os01g0100700 protein.synthesis.ribosomal... 0.27 Gene family
LOC_Os11g29190 Os11g0482000 protein.synthesis.ribosomal... 0.27 Gene family
MA_10428487g0010 No alias protein.synthesis.ribosomal... 0.07 Gene family
Smo164593 PACid_15411447 No description available 0.25 Gene family
Smo271466 PACid_15423175 No description available 0.18 Gene family
Zm00001d008387 GRMZM2G156673 protein.synthesis.ribosomal... 0.33 Gene family
Zm00001d037929 GRMZM2G078985 protein.synthesis.ribosomal... 0.27 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 70 215
No external refs found!