Solyc10g077070.2.1 (Solyc10g077070.2)


Aliases : Solyc10g077070.2

Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. SU(VAR)3-9 homolog 3 (SUVH3)


Gene families : OG_01_0000166 (Gene family) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g077070.2.1
Cluster HCCA cluster: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT2G35160 SUVH5, SGD9 SU(VAR)3-9 homolog 5 0.03 Gene family
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.02 Gene family
Cre02.g089200 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Cre07.g352600 No alias No description available 0.02 Gene family
GSVIVT01005913001 No alias No description available 0.05 Gene family
LOC_Os01g59620 Os01g0811300 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
LOC_Os05g41172 Os05g0490700 27.3.69 RNA.regulation of transcription.SET-domain... 0.06 Gene family
LOC_Os11g38900 Os11g0602200 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
MA_22288g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Smo104841 PACid_15415085 No description available 0.02 Gene family
Zm00001d005445 GRMZM2G025924 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Zm00001d010646 GRMZM2G140577 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Zm00001d019195 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d031858 GRMZM2G165011 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d038541 GRMZM2G117458 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Zm00001d043135 GRMZM2G139710 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 446 544
IPR001214 SET_dom 563 688
IPR003105 SRA_YDG 262 417
No external refs found!