Adi_g010168 (KIWI)

Aliases : KIWI

Description : transcriptional co-activator *(KIWI/KELP) involved in intine formation & original description: none

Gene families : OG0001404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g010168

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00247550	KIWI,...	RNA polymerase II transcriptional coactivator KIWI...	0.03	OrthoFinder output from all 47 species
Adi_g010167	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.05	OrthoFinder output from all 47 species
Azfi_s0032.g024977	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
LOC_Os01g50960.1	KELP, LOC_Os01g50960	RNA polymerase II transcriptional coactivator KELP...	0.02	OrthoFinder output from all 47 species
LOC_Os02g34840.1	KIWI, LOC_Os02g34840	RNA polymerase II transcriptional coactivator KIWI...	0.03	OrthoFinder output from all 47 species
Lfl_g13255	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.04	OrthoFinder output from all 47 species
Lfl_g38507	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Ore_g11688	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Pir_g62463	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Sam_g26014	No alias	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Solyc08g082580.3.1	KELP, Solyc08g082580	RNA polymerase II transcriptional coactivator KELP...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0048487	beta-tubulin binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003173	PC4_C	48	99

External Links

No external refs found!