1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00154p00016840

AMTR_s00154p00016840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.4

Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.NUF2 component


Gene families : OG_01_0004734 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004734_tree ,
OG_02_0004703 (LandPlants) Phylogenetic Tree(s): OG_02_0004703_tree ,
OG_03_0004003 (SeedPlants) Phylogenetic Tree(s): OG_03_0004003_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00016840
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.65 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 Archaeplastida
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.04 Archaeplastida
LOC_Os08g06600.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 Archaeplastida
MA_103013g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.04 Archaeplastida
Pp3c12_6220V3.1 No alias No annotation 0.09 Archaeplastida
Zm00001e006361_P001 No alias component NUF2 of NDC80 outer kinetochore complex 0.12 Archaeplastida
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 LandPlants
LOC_Os08g06600.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.03 LandPlants
MA_103013g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 LandPlants
Pp3c12_6220V3.1 No alias No annotation 0.08 LandPlants
Zm00001e006361_P001 No alias component NUF2 of NDC80 outer kinetochore complex 0.12 LandPlants
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.06 SeedPlants
LOC_Os08g06600.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.03 SeedPlants
MA_103013g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e006361_P001 No alias component NUF2 of NDC80 outer kinetochore complex 0.12 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2 3 138
No external refs found!