Adi_g009291 (RAB2A, AT-RAB2,...)

Aliases : RAB2A, AT-RAB2, RAB-B1B, ATRAB-B1B, RABB1C, ATRABB1C, ATRAB2A

Description : B-class RAB GTPase & original description: none

Gene families : OG0001412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g009291

Target	Alias	Description	ECC score	Gene Family Method
AT4G17170	RAB2A, AT-RAB2,...	RAB GTPase homolog B1C	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001001.25	RAB2A, AT-RAB2,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Cre09.g390763	RAB2A, AT-RAB2,...	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
GSVIVT01030140001	RAB2A, AT-RAB2,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Len_g03617	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g27208	RAB2A, AT-RAB2,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g08873	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g056150.4.1	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e007846_P001	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e041052_P001	RAB2A, AT-RAB2,...	B-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!