Adi_g008238 (RPS5B, ATRPS5B)


Aliases : RPS5B, ATRPS5B

Description : component *(uS7) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000325 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g008238
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Adi_g008926 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Adi_g033413 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g050867 AML1, RPS5A, ATRPS5A not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g068829 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g077239 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g077240 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g123865 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Als_g46680 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Als_g46683 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Aob_g42040 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Aob_g42115 RPS5B, ATRPS5B not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g49483 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Aop_g63213 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Cba_g28211 AML1, RPS5A, ATRPS5A component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Cba_g51974 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Cba_g61458 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Cba_g70097 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Cpa|evm.model.tig00021332.10 RPS5B, ATRPS5B Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 39 species
Cre06.g290950 RPS5B, ATRPS5B Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 39 species
Msp_g27158 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Pir_g57008 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Pir_g61774 RPS5B, ATRPS5B not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g62500 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g07600 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g16990 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g53333 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g54524 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g58992 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g61101 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Sam_g28096 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Zm00001e031425_P002 AML1, RPS5A,... component RPS5 of SSU proteome 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 58 203
No external refs found!