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  5. Adi_g008224

Adi_g008224 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g008224

Target Alias Description ECC score Gene Family Method Actions
AT5G09610 PUM21, APUM21 pumilio 21 0.03 OrthoFinder output from all 47 species
Adi_g008180 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02611 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18418 PUM7, APUM7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41521 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23704.t1 APUM12, PUM12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37289.t1 APUM12, PUM12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G074400.1 APUM12, PUM12,... not classified & original description: pacid=50576469... 0.03 OrthoFinder output from all 47 species
Ceric.30G062000.1 PUM7, APUM7,... not classified & original description: pacid=50608347... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 359 392
IPR001313 Pumilio_RNA-bd_rpt 470 493
IPR001313 Pumilio_RNA-bd_rpt 431 464
IPR001313 Pumilio_RNA-bd_rpt 324 354
IPR001313 Pumilio_RNA-bd_rpt 212 246
IPR001313 Pumilio_RNA-bd_rpt 248 278
IPR001313 Pumilio_RNA-bd_rpt 288 318
IPR001313 Pumilio_RNA-bd_rpt 396 414
IPR000571 Znf_CCCH 80 103
No external refs found!