Solyc10g055780.1.1 (Solyc10g055780.1)


Aliases : Solyc10g055780.1

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0001170 (Gene family) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g055780.1.1
Cluster HCCA cluster: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Solyc02g082920.3.1 Solyc02g082920.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Solyc02g082930.3.1 Solyc02g082930.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan
BP GO:0006032 chitin catabolic process IEA InterProScan
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 2 155
No external refs found!