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  5. Adi_g007764

Adi_g007764


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g007764

Target Alias Description ECC score Gene Family Method Actions
AT4G25440 ZFWD1 zinc finger WD40 repeat protein 1 0.02 OrthoFinder output from all 47 species
Ala_g08617 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g04213 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G064400.1 Ceric.26G064400 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034397001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45480.1 ZFWD1, LOC_Os02g45480 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_193932g0010 ZFWD1 Zinc finger CCCH domain-containing protein 48... 0.02 OrthoFinder output from all 47 species
Ore_g20246 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g14367 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 149 171
IPR001680 WD40_repeat 303 338
IPR001680 WD40_repeat 183 217
No external refs found!