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  5. Solyc10g055450.2.1

Solyc10g055450.2.1 (Solyc10g055450.2)


Aliases : Solyc10g055450.2

Description : 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. KAKTUS (KAK)


Gene families : OG_01_0001894 (Gene family) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g055450.2.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.1 Gene family
Cpa|evm.model.tig00020554.36 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.02 Gene family
GSVIVT01018731001 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.06 Gene family
GSVIVT01024033001 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.04 Gene family
LOC_Os02g01170 Os02g0101700 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.04 Gene family
MA_10426439g0010 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.03 Gene family
MA_140610g0010 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.04 Gene family
MA_62286g0020 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.05 Gene family
MA_884104g0010 No alias 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.07 Gene family
Smo146155 PACid_15421933 No description available 0.03 Gene family
Zm00001d004139 GRMZM2G049141 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.04 Gene family
Zm00001d010572 GRMZM2G328988 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000569 HECT_dom 1477 1846
No external refs found!