Adi_g006853


Description : component *(U2B) of U2 snRNP complex & original description: none


Gene families : OG0003415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003415_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g006853

Target Alias Description ECC score Gene Family Method Actions
Cre13.g566700 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder output from all 47 species
Dcu_g00743 No alias component *(U2B) of U2 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04288 No alias component *(U2B) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00324 No alias component *(U2B) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08271 No alias component *(U2B) of U2 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022362 No alias component *(U2B) of U2 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g12600 No alias component *(U2B) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g075200.4.1 U1A, Solyc09g075200 component U1A of U1 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Zm00001e031154_P002 U1A, Zm00001e031154 component U1A of U1 small nuclear ribonucleoprotein... 0.03 OrthoFinder output from all 47 species
Zm00001e038386_P002 U2B'', Zm00001e038386 protein factor U2B of U2 small nuclear ribonucleoprotein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 81
IPR000504 RRM_dom 152 211
No external refs found!