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Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G55980 | ATSZF1, SZF1 | salt-inducible zinc finger 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05322 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03756 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06734 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0203.g057679 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04032 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G081600.1 | Ceric.02G081600 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g146267 | ATTZF1, ATCTH | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g03949 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04434 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032807001 | SZF2, ATSZF2, ZFAR1, CZF1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033316001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38616 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g33090.1 | LOC_Os12g33090 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g09001 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18302 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g28700 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05681 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24865 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10175 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03800 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10809 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g17185 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25247 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00662 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g49541 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16736 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20981 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24839 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30312 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g31009 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005148 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017049 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g04991 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24875 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35915 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49873 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g052570.3.1 | SZF2, ATSZF2,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053750.1.1 | SOM, Solyc07g053750 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g008660.1.1 | Solyc12g008660 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g04687 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005347_P001 | Zm00001e005347 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027454_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |