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Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00094190 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17868 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g46412 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24197 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37584 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g40212 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23478 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43278.t1 | Aspi01Gene43278 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56416.t1 | CRR22, Aspi01Gene56416 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000999 | No alias | not classified & original description: CDS=128-2962 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012535 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036347 | CRR22 | not classified & original description: CDS=1-879 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0082.g038688 | No alias | not classified & original description: CDS=1-3078 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0118.g046614 | No alias | not classified & original description: CDS=1-2319 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0158.g053860 | CRR2 | not classified & original description: CDS=1-978 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057200 | No alias | not classified & original description: CDS=1-3033 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07300 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17193 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29359 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G028500.1 | CRR22, Ceric.12G028500 | not classified & original description: pacid=50602410... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G016300.1 | Ceric.16G016300 | not classified & original description: pacid=50589149... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z090000.1 | Ceric.1Z090000 | not classified & original description: pacid=50604599... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G019600.1 | Ceric.24G019600 | not classified & original description: pacid=50629269... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G047500.1 | Ceric.25G047500 | not classified & original description: pacid=50594463... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G025700.1 | CRR22, Ceric.30G025700 | not classified & original description: pacid=50609433... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G017300.1 | Ceric.36G017300 | not classified & original description: pacid=50568624... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G046100.1 | Ceric.38G046100 | not classified & original description: pacid=50579564... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03211 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21670 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g28696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46783 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_14659g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_184088g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_7907g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_81105g0010 | REME1 | RNA editing factor (OTP82) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28021 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34529 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02979 | PTAC9, OSB2 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15077 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15249 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22406 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22640 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23510 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29069 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34280 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36349 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63504 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63838 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011851 | OTP84 | not classified & original description: CDS=1-2175 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012770 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g04999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g16956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17148 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| No external refs found! |