MA_10431312g0020

Description : component RPP3 of LSU proteome component. component RPS19 of SSU proteome

Gene families : OG_01_0003127 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003127_tree ,
OG_02_0002232 (LandPlants) Phylogenetic Tree(s): OG_02_0002232_tree ,
OG_03_0002853 (SeedPlants) Phylogenetic Tree(s): OG_03_0002853_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10431312g0020
Cluster	HCCA: Cluster_471

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00182570	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.17	Archaeplastida
AT4G25890	No alias	60S acidic ribosomal protein family	0.17	Archaeplastida
AT5G57290	No alias	60S acidic ribosomal protein family	0.2	Archaeplastida
GSVIVT01010910001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	Archaeplastida
Gb_31564	No alias	component RPP3 of LSU proteome component	0.11	Archaeplastida
LOC_Os01g13080.1	No alias	component RPP3 of LSU proteome component	0.05	Archaeplastida
LOC_Os06g48780.1	No alias	component RPP3 of LSU proteome component	0.07	Archaeplastida
Mp3g07010.1	No alias	component RPP3 of LSU proteome component	0.1	Archaeplastida
Pp3c21_16160V3.1	No alias	60S acidic ribosomal protein family	0.14	Archaeplastida
Pp3c22_2920V3.1	No alias	60S acidic ribosomal protein family	0.12	Archaeplastida
Smo105823	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
Solyc07g009330.4.1	No alias	component RPP3 of LSU proteome component	0.25	Archaeplastida
Zm00001e013180_P001	No alias	component RPP3 of LSU proteome component	0.12	Archaeplastida
AMTR_s00025p00182570	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.15	LandPlants
AT4G25890	No alias	60S acidic ribosomal protein family	0.17	LandPlants
AT5G57290	No alias	60S acidic ribosomal protein family	0.18	LandPlants
GSVIVT01010910001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	LandPlants
Gb_31564	No alias	component RPP3 of LSU proteome component	0.11	LandPlants
LOC_Os01g13080.1	No alias	component RPP3 of LSU proteome component	0.05	LandPlants
LOC_Os06g48780.1	No alias	component RPP3 of LSU proteome component	0.07	LandPlants
Mp3g07010.1	No alias	component RPP3 of LSU proteome component	0.1	LandPlants
Pp3c21_16160V3.1	No alias	60S acidic ribosomal protein family	0.14	LandPlants
Pp3c22_2920V3.1	No alias	60S acidic ribosomal protein family	0.12	LandPlants
Smo105823	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	LandPlants
Solyc07g009330.4.1	No alias	component RPP3 of LSU proteome component	0.25	LandPlants
Zm00001e013180_P001	No alias	component RPP3 of LSU proteome component	0.12	LandPlants
AMTR_s00025p00182570	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.15	SeedPlants
AT4G25890	No alias	60S acidic ribosomal protein family	0.17	SeedPlants
AT5G57290	No alias	60S acidic ribosomal protein family	0.18	SeedPlants
GSVIVT01010910001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	SeedPlants
Gb_31564	No alias	component RPP3 of LSU proteome component	0.11	SeedPlants
LOC_Os01g13080.1	No alias	component RPP3 of LSU proteome component	0.05	SeedPlants
LOC_Os06g48780.1	No alias	component RPP3 of LSU proteome component	0.07	SeedPlants
Solyc07g009330.4.1	No alias	component RPP3 of LSU proteome component	0.21	SeedPlants
Zm00001e013180_P001	No alias	component RPP3 of LSU proteome component	0.12	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001266	Ribosomal_S19e	31	83

External Links

No external refs found!

MA_10431312g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation