Adi_g004518 (PDC2)

Aliases : PDC2

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g004518
Cluster	HCCA: Cluster_345

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01021184001	PDC2	Carbohydrate metabolism.fermentation.alcoholic...	0.03	OrthoFinder output from all 47 species
MA_470233g0010	No alias	Pyruvate decarboxylase 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0050997	quaternary ammonium group binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004408	holocytochrome-c synthase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	21	187
IPR011766	TPP_enzyme_TPP-bd	428	552
IPR012000	Thiamin_PyroP_enz_cen_dom	218	334

External Links

No external refs found!