Adi_g004508


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g004508

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g42313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29210 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27882 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009167 No alias not classified & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g015998 OTP84 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045771 No alias not classified & original description: CDS=1-2433 0.02 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0216.g058493 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Azfi_s0303.g063761 No alias not classified & original description: CDS=81-2876 0.04 OrthoFinder output from all 47 species
Azfi_s1707.g105997 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G048700.1 CRR22, Ceric.20G048700 not classified & original description: pacid=50567179... 0.04 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.05 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.03 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14215 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22233 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010489 No alias not classified & original description: CDS=290-3358 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026000 No alias not classified & original description: CDS=66-1799 0.03 OrthoFinder output from all 47 species
Sam_g07203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17314 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 354 383
IPR002885 Pentatricopeptide_repeat 50 72
No external refs found!