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Aliases : WLIM1
Description : LIM-type transcription factor & original description: none
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00199510 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G01780 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39900 | No alias | GATA type zinc finger transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G55770 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006630 | WLIM1 | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g080585 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21872 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49721 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19745.t1 | Aspi01Gene19745 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71186.t1 | WLIM1, Aspi01Gene71186 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0327.g065256 | WLIM1 | LIM-type transcription factor & original description: CDS=201-761 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05610 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20782 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G013400.1 | Ceric.35G013400 | LIM-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15520 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26985 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05547 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g35930.1 | LOC_Os10g35930 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07886 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03720 | WLIM1 | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g27678 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_104604g0010 | WLIM1 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g43157 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23708 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g33833 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g09908 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14488 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo229974 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g044740.2.1 | WLIM1, Solyc11g044740 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22855 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06395 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12254 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018310_P001 | WLIM1, Zm00001e018310 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023098_P001 | Zm00001e023098 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |