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  5. Adi_g002827

Adi_g002827


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g002827

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00143240 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Adi_g016707 No alias associated component *(AFR) of histone deacetylase... 0.07 OrthoFinder output from all 47 species
Adi_g046047 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Adi_g115577 No alias associated component *(AFR) of histone deacetylase... 0.09 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Als_g23594 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aop_g26979 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene69929.t1 Aspi01Gene69929 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038914 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dcu_g38581 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ehy_g08311 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ehy_g09035 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Gb_06121 No alias associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Len_g14311 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Lfl_g18360 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
MA_45410g0010 No alias associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
Mp7g07500.1 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Ppi_g30334 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Sam_g30195 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Solyc08g081310.4.1 Solyc08g081310 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Spa_g11049 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Spa_g25179 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 180 234
No external refs found!