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  5. Adi_g002810

Adi_g002810


Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g002810

Target Alias Description ECC score Gene Family Method Actions
Als_g20376 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03476 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03737 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023893001 PUB15 U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Nbi_g06986 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22628 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37794 PUB13, ATPUB13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12544 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Smo113592 No alias U-box domain-containing protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo420513 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc11g066040.2.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 91 128
IPR000225 Armadillo 130 169
IPR000225 Armadillo 213 251
No external refs found!