Solyc10g047350.2.1 (Solyc10g047350.2)


Aliases : Solyc10g047350.2

Description : 26.7 misc.oxidases - copper, flavone etc Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1 (LDL1)


Gene families : OG_01_0000705 (Gene family) Phylogenetic Tree(s): OG0000705_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g047350.2.1
Cluster HCCA cluster: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Zm00001d024647 GRMZM2G149786 26.7 misc.oxidases - copper, flavone etc Encodes a... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002937 Amino_oxidase 260 338
IPR007526 SWIRM 154 231
No external refs found!