AMTR_s00152p00084120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00152.28

Description : Solute transport.channels.MCA mechanosensitive cation channel


Gene families : OG_01_0002116 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002116_tree ,
OG_02_0001916 (LandPlants) Phylogenetic Tree(s): OG_02_0001916_tree ,
OG_03_0002070 (SeedPlants) Phylogenetic Tree(s): OG_03_0002070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00152p00084120
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT4G35920 MCA1 PLAC8 family protein 0.03 Archaeplastida
Gb_10308 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.06 Archaeplastida
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.1 Archaeplastida
MA_10433546g0010 No alias Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.04 Archaeplastida
MA_1425g0010 No alias Cell number regulator 13 OS=Zea mays... 0.04 Archaeplastida
MA_191168g0010 No alias Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_2315602g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6161g0010 No alias Cell number regulator 13 OS=Zea mays... 0.02 Archaeplastida
Mp5g19510.1 No alias mechanosensitive cation channel (MCA) 0.05 Archaeplastida
Pp3c12_21520V3.1 No alias PLAC8 family protein 0.04 Archaeplastida
Solyc02g083540.3.1 No alias mechanosensitive cation channel (MCA) 0.04 Archaeplastida
Solyc03g095820.4.1 No alias mechanosensitive cation channel (MCA) 0.03 Archaeplastida
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.08 Archaeplastida
AT4G35920 MCA1 PLAC8 family protein 0.03 LandPlants
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.05 LandPlants
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.06 LandPlants
MA_1425g0010 No alias Cell number regulator 13 OS=Zea mays... 0.02 LandPlants
MA_191168g0010 No alias Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 LandPlants
MA_424555g0010 No alias mechanosensitive cation channel (MCA) 0.02 LandPlants
Mp5g19510.1 No alias mechanosensitive cation channel (MCA) 0.05 LandPlants
Pp3c12_21430V3.1 No alias PLAC8 family protein 0.02 LandPlants
Pp3c12_21520V3.1 No alias PLAC8 family protein 0.03 LandPlants
Solyc02g083540.3.1 No alias mechanosensitive cation channel (MCA) 0.04 LandPlants
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.06 LandPlants
AT4G35920 MCA1 PLAC8 family protein 0.03 SeedPlants
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.04 SeedPlants
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.06 SeedPlants
MA_424555g0010 No alias mechanosensitive cation channel (MCA) 0.02 SeedPlants
Solyc02g083540.3.1 No alias mechanosensitive cation channel (MCA) 0.02 SeedPlants
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 300 398
No external refs found!