Solyc10g047130.2.1 (Solyc10g047130.2)


Aliases : Solyc10g047130.2

Description : 27.4 RNA.RNA binding Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. ATRZ-1A


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g047130.2.1
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G60650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Gene family
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.04 Gene family
Cre09.g392350 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.03 Gene family
Cre17.g729150 No alias No description available 0.03 Gene family
GSVIVT01001672001 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
GSVIVT01021024001 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.03 Gene family
GSVIVT01033666001 No alias No description available 0.05 Gene family
MA_10428777g0010 No alias 27.4 RNA.RNA binding Encodes a small glycine-rich RNA... 0.03 Gene family
MA_10436424g0010 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.02 Gene family
MA_112005g0010 No alias No description available 0.02 Gene family
Zm00001d012052 GRMZM2G042118,... 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.02 Gene family
Zm00001d019041 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
Zm00001d022065 GRMZM2G131167 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.07 Gene family
Zm00001d023734 GRMZM2G009448 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.07 Gene family
Zm00001d033511 GRMZM2G083783 No description available 0.05 Gene family
Zm00001d041750 GRMZM2G150521,... 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 126 142
IPR000504 RRM_dom 10 78
No external refs found!