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  5. Ehy_g07914

Ehy_g07914 (HOS1)


Aliases : HOS1

Description : scaffold nucleoporin of nuclear pore complex *(ELYS) & original description: none


Gene families : OG0005065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07914
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00044750 HOS1,... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
AT2G39810 HOS1 ubiquitin-protein ligases 0.05 OrthoFinder output from all 47 species
Ala_g10365 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Als_g56636 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
Ceric.36G007400.1 HOS1, Ceric.36G007400 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.05 OrthoFinder output from all 47 species
Dac_g15962 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Dcu_g07754 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01005813001 HOS1 Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
LOC_Os03g52700.1 HOS1, LOC_Os03g52700 ELYS scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
MA_10431906g0010 HOS1 ELYS scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
MA_573521g0010 HOS1 ELYS scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Pir_g10456 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Ppi_g01205 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.02 OrthoFinder output from all 47 species
Sam_g19447 No alias scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
Solyc08g078320.3.1 HOS1, Solyc08g078320 ELYS scaffold nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Spa_g09103 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.05 OrthoFinder output from all 47 species
Zm00001e012079_P002 HOS1, Zm00001e012079 ELYS scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025151 ELYS_dom 293 587
No external refs found!